From c32580b66e826b9a938fc8537b7236245bcbecc8 Mon Sep 17 00:00:00 2001 From: ming Date: Wed, 8 Jan 2025 10:19:16 +0800 Subject: [PATCH] render compile --- MS/MS.aux | 10 +- MS/MS.html.md | 44 +++--- MS/SM.aux | 18 +-- MS/SM.tex | 377 -------------------------------------------------- 4 files changed, 33 insertions(+), 416 deletions(-) delete mode 100644 MS/SM.tex diff --git a/MS/MS.aux b/MS/MS.aux index 1525ba9..43a420b 100644 --- a/MS/MS.aux +++ b/MS/MS.aux @@ -1,17 +1,12 @@ \relax \providecommand\zref@newlabel[2]{} +\providecommand*\new@tpo@label[2]{} \providecommand\hyper@newdestlabel[2]{} \providecommand*\HyPL@Entry[1]{} \providecommand \babel@aux [2]{\global \let \babel@toc \@gobbletwo } \@nameuse{bbl@beforestart} -\bibstyle{elsarticle-harv} -\emailauthor{mingsu@rcees.ac.cn}{Ming Su} -\emailauthor{yangmin@rcees.ac.cn}{Min Yang\corref {cor1}} -\Newlabel{cor1}{1} \HyPL@Entry{0<>} \babel@aux{english}{} -\Newlabel{1}{a} -\Newlabel{2}{b} \@writefile{toc}{\contentsline {section}{\numberline {1}Introduction}{1}{section.1}\protected@file@percent } \newlabel{introduction}{{1}{1}{Introduction}{section.1}{}} \newlabel{r:r1q0101}{{Bla blaBla blaBla blaBla blaBla bla Bla bla.}{}} @@ -21,7 +16,6 @@ \newlabel{line:r1q0101end}{{10}{1}{}{}{}} \@writefile{toc}{\contentsline {section}{\numberline {2}Materials and methods}{1}{section.2}\protected@file@percent } \newlabel{materials-and-methods}{{2}{1}{Materials and methods}{section.2}{}} -\bibdata{../BB/Ref.bib,../BB/localRef.bib} \@writefile{toc}{\contentsline {section}{\numberline {3}Results}{2}{section.3}\protected@file@percent } \newlabel{results}{{3}{2}{Results}{section.3}{}} \@writefile{toc}{\contentsline {section}{\numberline {4}Discussion}{2}{section.4}\protected@file@percent } @@ -30,4 +24,6 @@ \newlabel{conclusions}{{5}{2}{Conclusions}{section.5}{}} \newlabel{acknowledgements}{{5}{2}{Acknowledgements}{section*.1}{}} \@writefile{toc}{\contentsline {section}{Acknowledgements}{2}{section*.1}\protected@file@percent } +\newlabel{references}{{5}{2}{References}{section*.2}{}} +\@writefile{toc}{\contentsline {section}{References}{2}{section*.2}\protected@file@percent } \gdef \@abspage@last{2} diff --git a/MS/MS.html.md b/MS/MS.html.md index e2647bf..f393671 100644 --- a/MS/MS.html.md +++ b/MS/MS.html.md @@ -12,42 +12,46 @@ bibliography: [../BB/Ref.bib, ../BB/localRef.bib] csl: _extensions/inst/tex/elsevier-harvard.csl format: elsevier-html: + toc: true css: _extensions/inst/css/style.css keep-md: true epub: default docx: reference-doc: _extensions/inst/word/MS.docx - elsevier-pdf: - keep-tex: false + pdf: + # documentclass: article + latex-clean: false # to keep aux + citecolor: blue + colorlinks: true + number-sections: true + sansfont: "Gill Sans" + papersize: a4paper + sansfontoptions: + - Color=39729E + mainfont: "Source Sans 3" #| Verdana (fontsize: 11pt) # Source Sans 3 | Times New Roman| Helvetica | PT Sans + monofont: "JetBrains Mono" + mathfont: "Cambria Math" + CJKmainfont: SimHei + fontsize: 12pt keep-md: false - include-in-header: "./_extensions/quarto-journals/elsevier/partials/revision.tex" - latex-clean: false + include-in-header: "./_extensions/inst/tex/header.tex" header-includes: - # - \usepackage{threeparttable} # - \usepackage{fontspec} - # - \usepackage{endfloat} - - \setmainfont{Calibri} - - \usepackage[UTF8, scheme=plain]{ctex} + - \usepackage{endfloat} + # - \usepackage[UTF8, scheme=plain]{ctex} - \usepackage{float} - \usepackage[normalem]{ulem} - \usepackage[doublespacing]{setspace} - \usepackage{lineno} - \linenumbers - journal: - formatting: preprint # preprint | review | doublebind - model: 1p - cite-style: authoryear - # graphical-abstract: "![](../figures/GA3.pdf)" - # highlights: - # - A comprehensive model was contructed to evaluate the risk of odor occurrences - # - Turbidity distribution determine underwater light and MIB-producing *Planktothrix* - # - Increasing flowrate increases turbidity that can control *Planktothrix* and MIB - # - Odor control based on flow regulation in source water is "green" and fundamental filters: - - latex-environment - - authors-block + - latex-environment + - authors-block lightbox: auto commands: [clab] +editor: + markdown: + wrap: sentence --- diff --git a/MS/SM.aux b/MS/SM.aux index 7a1f588..6f9b36e 100644 --- a/MS/SM.aux +++ b/MS/SM.aux @@ -1,21 +1,15 @@ \relax \providecommand\zref@newlabel[2]{} +\providecommand*\new@tpo@label[2]{} \providecommand\hyper@newdestlabel[2]{} \providecommand*\HyPL@Entry[1]{} \providecommand \babel@aux [2]{\global \let \babel@toc \@gobbletwo } \@nameuse{bbl@beforestart} -\bibstyle{elsarticle-num} -\emailauthor{mingsu@rcees.ac.cn}{Ming Su} -\emailauthor{yangmin@rcees.ac.cn}{Min Yang\corref {cor1}} -\Newlabel{cor1}{1} \HyPL@Entry{0<>} \babel@aux{english}{} -\Newlabel{1}{a} -\Newlabel{2}{b} -\newlabel{supplementary-material}{{b}{1}{Supplementary Material}{section*.1}{}} -\@writefile{toc}{\contentsline {section}{Supplementary Material}{1}{section*.1}\protected@file@percent } -\bibdata{../BB/Ref.bib,../BB/localRef.bib} -\@writefile{lost}{\contentsline {sfg}{\numberline {1}{\ignorespaces This is demo figure in supplementary material}}{2}{sfg.1}\protected@file@percent } +\newlabel{supplementary-material}{{}{2}{Supplementary Material}{section*.1}{}} +\@writefile{toc}{\contentsline {section}{Supplementary Material}{2}{section*.1}\protected@file@percent } +\@writefile{lost}{\contentsline {sfg}{\numberline {1}{\ignorespaces This is demo figure in supplementary material}}{3}{sfg.1}\protected@file@percent } \providecommand*\caption@xref[2]{\@setref\relax\@undefined{#1}} -\newlabel{sfg-demofigure}{{1}{2}{This is demo figure in supplementary material}{sfg.1}{}} -\gdef \@abspage@last{2} +\newlabel{sfg-demofigure}{{1}{3}{This is demo figure in supplementary material}{sfg.1}{}} +\gdef \@abspage@last{3} diff --git a/MS/SM.tex b/MS/SM.tex deleted file mode 100644 index 76cb201..0000000 --- a/MS/SM.tex +++ /dev/null @@ -1,377 +0,0 @@ -% Options for packages loaded elsewhere -\PassOptionsToPackage{unicode}{hyperref} -\PassOptionsToPackage{hyphens}{url} -\PassOptionsToPackage{dvipsnames,svgnames,x11names}{xcolor} -% -\documentclass[ - 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-\usepackage[normalem]{ulem} -\renewcommand{\thetable}{S\arabic{table}} -\renewcommand{\thefigure}{S\arabic{figure}} -\renewcommand{\theequation}{S\arabic{equation}} -\setmainfont{Calibri} -\usepackage[doublespacing]{setspace} -\usepackage{lineno} -\linenumbers -\makeatletter -\@ifpackageloaded{float}{}{\usepackage{float}} -\floatstyle{plain} -\@ifundefined{c@chapter}{\newfloat{sfg}{h}{lost}}{\newfloat{sfg}{h}{lost}[chapter]} -\floatname{sfg}{Fig. S} -\newcommand*\quartosfgref[1]{Fig. \hyperref[#1]{S\ref{#1}}} -\@ifpackageloaded{caption}{}{\usepackage{caption}} -\DeclareCaptionLabelFormat{quartosfgreflabelformat}{#1#2} -\captionsetup[sfg]{labelformat=quartosfgreflabelformat} -\newcommand*\listofsfgs{\listof{sfg}{List of Supplementary Figures}} -\makeatother -\makeatletter -\@ifpackageloaded{float}{}{\usepackage{float}} -\floatstyle{plain} -\@ifundefined{c@chapter}{\newfloat{stb}{h}{lost}}{\newfloat{stb}{h}{lost}[chapter]} -\floatname{stb}{Table S} -\newcommand*\quartostbref[1]{Table \hyperref[#1]{S\ref{#1}}} -\@ifpackageloaded{caption}{}{\usepackage{caption}} -\DeclareCaptionLabelFormat{quartostbreflabelformat}{#1#2} -\captionsetup[stb]{labelformat=quartostbreflabelformat} -\newcommand*\listofstbs{\listof{stb}{List of Supplementary Tables}} -\makeatother -\makeatletter -\@ifpackageloaded{float}{}{\usepackage{float}} -\floatstyle{plain} -\@ifundefined{c@chapter}{\newfloat{seq}{h}{lost}}{\newfloat{seq}{h}{lost}[chapter]} -\floatname{seq}{Eq S} -\newcommand*\quartoseqref[1]{Eq \hyperref[#1]{S\ref{#1}}} -\@ifpackageloaded{caption}{}{\usepackage{caption}} -\DeclareCaptionLabelFormat{quartoseqreflabelformat}{#1#2} -\captionsetup[seq]{labelformat=quartoseqreflabelformat} -\newcommand*\listofseqs{\listof{seq}{List of Supplementary Equations}} -\makeatother -\makeatletter -\@ifpackageloaded{float}{}{\usepackage{float}} -\floatstyle{plain} -\@ifundefined{c@chapter}{\newfloat{rfg}{h}{lost}}{\newfloat{rfg}{h}{lost}[chapter]} -\floatname{rfg}{Fig. R} -\newcommand*\quartorfgref[1]{Fig. \hyperref[#1]{R\ref{#1}}} -\@ifpackageloaded{caption}{}{\usepackage{caption}} -\DeclareCaptionLabelFormat{quartorfgreflabelformat}{#1#2} -\captionsetup[rfg]{labelformat=quartorfgreflabelformat} -\newcommand*\listofrfgs{\listof{rfg}{List of Revision Figures}} -\makeatother -\makeatletter -\@ifpackageloaded{float}{}{\usepackage{float}} -\floatstyle{plain} -\@ifundefined{c@chapter}{\newfloat{rtb}{h}{lost}}{\newfloat{rtb}{h}{lost}[chapter]} -\floatname{rtb}{Table R} -\newcommand*\quartortbref[1]{Table \hyperref[#1]{R\ref{#1}}} -\@ifpackageloaded{caption}{}{\usepackage{caption}} -\DeclareCaptionLabelFormat{quartortbreflabelformat}{#1#2} -\captionsetup[rtb]{labelformat=quartortbreflabelformat} -\newcommand*\listofrtbs{\listof{rtb}{List of Revision Tables}} -\makeatother -\makeatletter -\@ifpackageloaded{float}{}{\usepackage{float}} -\floatstyle{plain} -\@ifundefined{c@chapter}{\newfloat{req}{h}{lost}}{\newfloat{req}{h}{lost}[chapter]} -\floatname{req}{Eq R} -\newcommand*\quartoreqref[1]{Eq \hyperref[#1]{R\ref{#1}}} -\@ifpackageloaded{caption}{}{\usepackage{caption}} -\DeclareCaptionLabelFormat{quartoreqreflabelformat}{#1#2} -\captionsetup[req]{labelformat=quartoreqreflabelformat} -\newcommand*\listofreqs{\listof{req}{List of Revision Equations}} -\makeatother -\makeatletter -\@ifpackageloaded{caption}{}{\usepackage{caption}} -\AtBeginDocument{% -\ifdefined\contentsname - \renewcommand*\contentsname{Table of contents} -\else - \newcommand\contentsname{Table of contents} -\fi -\ifdefined\listfigurename - \renewcommand*\listfigurename{List of Figures} -\else - \newcommand\listfigurename{List of Figures} -\fi -\ifdefined\listtablename - \renewcommand*\listtablename{List of Tables} -\else - \newcommand\listtablename{List of Tables} -\fi -\ifdefined\figurename - \renewcommand*\figurename{Fig.} -\else - \newcommand\figurename{Fig.} -\fi -\ifdefined\tablename - \renewcommand*\tablename{Table} -\else - \newcommand\tablename{Table} -\fi -} -\@ifpackageloaded{float}{}{\usepackage{float}} -\floatstyle{ruled} -\@ifundefined{c@chapter}{\newfloat{codelisting}{h}{lop}}{\newfloat{codelisting}{h}{lop}[chapter]} -\floatname{codelisting}{Listing} -\newcommand*\listoflistings{\listof{codelisting}{List of Listings}} -\captionsetup{labelsep=none} -\makeatother -\makeatletter -\makeatother -\makeatletter -\@ifpackageloaded{caption}{}{\usepackage{caption}} -\@ifpackageloaded{subcaption}{}{\usepackage{subcaption}} -\makeatother - -\ifLuaTeX -\usepackage[bidi=basic]{babel} -\else -\usepackage[bidi=default]{babel} -\fi -\babelprovide[main,import]{english} -% get rid of language-specific shorthands (see #6817): -\let\LanguageShortHands\languageshorthands -\def\languageshorthands#1{} -\ifLuaTeX - \usepackage[english]{selnolig} % disable illegal ligatures -\fi -\usepackage[]{natbib} -\bibliographystyle{elsarticle-num} -\usepackage{bookmark} - -\IfFileExists{xurl.sty}{\usepackage{xurl}}{} % add URL line breaks if available -\urlstyle{same} % disable monospaced font for URLs -\hypersetup{ - pdftitle={MANUSCRIPT TITLE}, - pdfauthor={, and }, - pdflang={en}, - colorlinks=true, - linkcolor={blue}, - filecolor={Maroon}, - citecolor={Blue}, - urlcolor={Blue}, - pdfcreator={LaTeX via pandoc}} - - -\setlength{\parindent}{6pt} -\begin{document} -\begin{frontmatter} -\title{MANUSCRIPT TITLE } - -\author[1,2]{Ming Su% -% -} - \ead{mingsu@rcees.ac.cn} -\author[1,2]{Min Yang% -\corref{cor1}% -} - \ead{yangmin@rcees.ac.cn} - -\affiliation[1]{organization={State Key Laboratory of Environmental -Aquatic Chemistry, Research Center for Eco-Environmental Sciences, -Chinese Academy of Sciences},addressline={P.O. Box -2871},city={Beijing},postcode={100085}} -\affiliation[2]{organization={University of Chinese Academy of -Sciences},city={Beijing},postcode={100049}} - -\cortext[cor1]{Corresponding author} - - - - - - - - -\end{frontmatter} - - -\textsuperscript{1} State Key Laboratory of Environmental Aquatic -Chemistry, Research Center for Eco-Environmental Sciences, Chinese -Academy of Sciences\\ -\textsuperscript{2} University of Chinese Academy of Sciences - -\textsuperscript{*} Correspondence: -\href{mailto:yangmin@rcees.ac.cn}{Min Yang -\textless{}yangmin@rcees.ac.cn\textgreater{}} - -\section*{Supplementary Material}\label{supplementary-material} -\addcontentsline{toc}{section}{Supplementary Material} - -Figures and/or tables are provided below as the supplementary evidences -to the main text. - -\pagebreak - -\begin{sfg} - -\centering{ - -\includegraphics[width=0.6\linewidth,height=\textheight,keepaspectratio]{../figures/demofigure.pdf} - -} - -\caption{\label{sfg-demofigure}This is demo figure in supplementary -material} - -\end{sfg}% - - - \bibliography{../BB/Ref.bib,../BB/localRef.bib} - - - -\end{document}